PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.CAS5B
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 296aa    MW: 32878.8 Da    PI: 6.9226
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.CAS5BgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.91.1e-051642127
                 CHHHHHHHHHHHHHHHHHHHHHHHCTS CS
          HLH  1 rrrahnerErrRRdriNsafeeLrell 27
                 r++ +  rE+ RRdr+N+ f+ L   l
  Araip.CAS5B 16 RKVQKADREKLRRDRLNDHFHDLANTL 42
                 5677889****************8765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
EKGQAEPPQD PAVAARKVQK ADREKLRRDR LNDHFHDLAN TLGLSLSLSL LHDYNHFACI  60
IHSHNCCDWD IYFAPLIMLK TEHKALSDES RELMQEKNEL REEKASLKSD IENLNSQYQQ  120
RARMMFPWTA MDHSVVMAPP PYSYPVPIPI PPAPVPIHPT LQPFPYFGNQ NPPHIPTPCS  180
TYVPFSAPIN AALDLPSAQY ASASHVPTQK DCRSKSPPHR RITDSESHDV ATELELKMPG  240
SSSTQEESSS GGTKKVKHSG RKDRVVAEGS ASSRYSTSHG LQDSSNSVGD IPKADS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016199031.11e-164PREDICTED: transcription factor bHLH121-like, partial
TrEMBLA0A072VR731e-102A0A072VR73_MEDTR; Transcription factor
STRINGGLYMA07G26910.11e-101(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22823376
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.14e-46bHLH family protein